PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr037206.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 266aa    MW: 28973.8 Da    PI: 5.8287
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr037206.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.27.4e-1790139155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  ++y+G+r ++  g+Wv+eIr+p++   +kr++lg+f t+e+Aa+a++ a+++l+g
  Pbr037206.1  90 PRYRGIR-CR-GGKWVSEIREPRK---TKRIWLGTFPTPEMAAAAYDVAALALKG 139
                  68****9.55.7*********843...5************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.0E-1090139IPR001471AP2/ERF domain
CDDcd000187.02E-1590147No hitNo description
SuperFamilySSF541717.19E-1891148IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.0E-2591147IPR001471AP2/ERF domain
SMARTSM003802.4E-2691155IPR001471AP2/ERF domain
PROSITE profilePS5103220.12691147IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MADPNPNTNT SNIVHQTIDQ STPTDPHLVV SPLDFHPPPP HQVLPHSLLP LQHQTCETIE  60
IPSPSARAPL QVQTLPKPAT MASSSSGKHP RYRGIRCRGG KWVSEIREPR KTKRIWLGTF  120
PTPEMAAAAY DVAALALKGT DVALNFPSLI GSYPVPPSTS ALDIRTAATT AAAALQKNSY  180
SMESPKMGQM QKHEVDDMMM SSTSLASSVG YFMDEEELFQ MPNLLVDMAE GMLVSPPRMN  240
DSLPSDYDDS PGNSDGREGR LWSYY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009344262.10.0PREDICTED: ethylene-responsive transcription factor ERF027-like
RefseqXP_009377922.10.0PREDICTED: ethylene-responsive transcription factor ERF027-like
SwissprotQ9FJ902e-47ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A0M4KMA91e-99A0A0M4KMA9_9R
STRINGVIT_16s0100g00400.t012e-68(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.15e-45ERF family protein